50.  05/21      J. Li, P. Pimentel, A. Szengel, M. Ehlke, H. Lamecker, S. Zachow, L. Estacio, C. Doenitz, H. Ramm, H. Shi, X. Chen, F. Matzkin, V. Newcombe, E. Ferrante, Y. Jin, D. G. Ellis, M. R. Aizenberg, O. Kodym, M. Španěl, A. Herout, J. G. Mainprize, Z. Fishman, M. R. Hardisty, A. Bayat, S. Shit, B. Wang, Z. Liu, M. Eder, A. Pepe, C. Gsaxner, V. Alves, U. Zefferer, G. von Campe, K. Pistracher, U. Schäfer, D. Schmalstieg, B. H. Menze, B. Glocker, J. Egger
         “AutoImplant 2020 - First MICCAI Challenge on Automatic Cranial Implant Design“
         In: IEEE Transactions on Medical Imaging (TMI), 15 pages, 2021. (Link) (IF 6.685 (2020))
       
49.  02/21      O. Kodym, J. Li, A. Pepe, C. Gsaxner, S. Chilamkurthy, J. Egger, M. Španěl
         “SkullBreak / SkullFix – Dataset for Automatic Cranial Implant Design and a Benchmark for Volumetric Shape Learning Tasks“
         In: Data in Brief (DIB), Elsevier, 106902, ISSN 2352-3409, 2021. (Link) (IF 0.105 (2019))
       
48.  01/21      J. Li, C. Gsaxner, A. Pepe, A. Morais, V. Alves, G. von Campe, J. Wallner, J. Egger
         “Synthetic skull bone defects for automatic patient-specific craniofacial implant design“
         In: Scientific Data, volume 8, Article number: 36, 2021. (Link) (IF 5.541 (2019))
       
47.  12/20      A. J. Lungu, W. Swinkels, L. Claesen, P. Tu, J. Egger, X. Chen
         “A Review on the Applications of Virtual Reality, Augmented Reality and Mixed Reality in Surgical Simulation: An Extension to Different Kinds of Surgery”
         Expert Review of Medical Devices, Taylor & Francis, December 2020. (IF 2.2 (2019))
       
46.  11/20      C. Gsaxner, A. Pepe, J. Li, U. Ibrahimpasic, J. Wallner, D. Schmalstieg, J. Egger
         “Augmented Reality for Head and Neck Carcinoma Imaging: Description and Feasibility of an Instant Calibration, Markerless Approach”
         Computer Methods and Programs in Biomedicine, Elsevier, November 2020. (IF 3.632 (2019))
       
45.  07/20      A. Pepe, J. Li, M. Rolf-Pissarczyk, C. Gsaxner, X. Chen, G. A. Holzapfel, J. Egger
         “Detection, Segmentation, Simulation and Visualization of Aortic Dissections: A Review“
         In: Medical Image Analysis, Elsevier, pp. 1-19, 2020. (IF 11.148 (2019))
       
44.  02/20      A.R. Memon, E. Wang, J. Hu, J. Egger, X. Chen
         “A review on computer-aided design and manufacturing of patient-specific maxillofacial implants“
         In: Expert Rev Med Devices, Taylor & Francis Group, pp. 1-12, 2020. (IF 2.212 (2018))
       
43.  12/19      C. Gsaxner, J. Wallner, X. Chen, W. Zemann, J. Egger
         “Facial model collection for medical augmented reality in oncologic cranio-maxillofacial surgery“
         In: Scientific Data 6(1):310, 2019. (IF 5.929 (2018))
       
42.  09/19      J. Wallner, M. Schwaiger, K. Hochegger, C. Gsaxner, W. Zemann, J. Egger
         “A Review on Multiplatform Evaluations of Semi-Automatic Open-Source Based Image Segmentation for Cranio-Maxillofacial Surgery“
         In: Computer Methods and Programs in Biomedicine, 182:105102, pp. 1-23, Sep. 2019. (IF 3.424 (2018))
       
41.  09/19      A. Pepe, G. F. Trotta, P. Mohr-Ziak, C. Gsaxner, J. Wallner, V. Bevilacqua, J. Egger
         “A Marker-Less Registration Approach for Mixed Reality–Aided Maxillofacial Surgery: a Pilot Evaluation“
         In: Journal of Digital Imaging, 32, pp. 1008-1018, Sep. 2019. (IF 2.572 (2018))
       
40.  07/19      M. Pau, J. Wallner, M. Feichtinger, M. Schwaiger, J. Egger, J. Cambiaso-Daniel, R. Winter, N. Jakse, W. Zemann
         “Free thoracodorsal, perforator-scapular flap based on the angular artery (TDAP-Scap-aa): Clinical experiences and description of a novel technique for single flap reconstruction of extensive oromandibular defects“
         In: Journal of Cranio-Maxillofacial Surgery, 47(10):1617-1625, Jul. 2019. (IF 1.942 (2018))
       
39.  03/19      C. Gsaxner, P. Roth, J. Wallner, J. Egger
         “Exploit fully automatic low-level segmented PET Data for training high-level Deep Learning Algorithms for the corresponding CT Data“
         In: PLoS ONE 14(3): e0212550, Mar. 2019. (Link) (thesis) (IF 2.776 (2018))
       
38.  01/19      J. Wallner, I Mischak, J. Egger
         “Computed tomography data collection of the complete human mandible and valid clinical ground truth models“
         In: Scientific Data volume 6, Article number: 190003, 2019. (Link) (IF 5.929 (2018))
       
37.  05/18      J. Wallner, K. Hochegger, X. Chen, I. Mischak, K. Reinbacher, M. Pau, T. Zrnc, K. Schwenzer-Zimmerer, W. Zemann, D. Schmalstieg, J. Egger
         “Clinical evaluation of semi-automatic opensource algorithmic software segmentation of the mandibular bone: Practical feasibility and assessment of a new course of action“
         In: PLoS ONE 13(5): e0196378, May 2018. (Link) (IF 2.776 (2018))
       
36.  05/18      S. Bruneder, J. Wallner, A. Weiglein, K. Ludmila, J. Egger, U. Pilsl, W. Zemann
         “Anatomy of the Le Fort I segment: Are arterial variations a potential risk factor for avascular bone necrosis in Le Fort I osteotomies?“
         In: Journal of Cranio-Maxillofacial Surgery, 46(8):1285-1295, May 2018. (IF 1.942 (2018))
       
35.  03/18      A. Hann, E. Nosalski, P.C. Hermann, J. Egger, T. Seufferlein, F. Keller
         “Chemotherapeutic agents eligible for prior dosing in pancreatic cancer patients requiring hemodialysis: a systematic review“
         In: Clinical Nephrology - Dustri-Verlag, pp. 1-17, Mar. 2018. (IF 1.079 (2018))
       
34.  11/17      J. Egger, C. Nimsky, X. Chen
         “Vertebral body segmentation with GrowCut: Initial experience, workflow and practical application“
         In: SAGE Open Medicine, Volume 5, pp. 1-10, Nov. 2017. (Link) (pdf) (IF 0.675 (2018))
       
33.  10/17      A. Hann, L. Bettac, M. M. Haenle, T. Graeter, A. W. Berger, J. Dreyhaupt, D. Schmalstieg, W. G. Zoller, J. Egger
         “Algorithm guided outlining of 105 pancreatic cancer liver metastases in Ultrasound“
         In: Sci. Rep. 7, 12779, 2017. (Link) (IF 4.122 (2017))
       
32.  08/17      J. Egger, J. Wallner, M. Gall, X. Chen, K. Schwenzer-Zimmerer, K. Reinbacher, D. Schmalstieg
         “Computer-aided position planning of miniplates to treat facial bone defects“
         In: PLoS ONE 12(8): e0182839, Aug. 2017. (Link) (thesis) (IF 2.766 (2017))
       
31.  06/17      X. Chen, L. Xu, X. Li, J. Egger
         “Computer-aided implant design for the restoration of cranial defects“
         In: Sci. Rep. 7, 4199, 2017. (Link) (IF 4.122 (2017))
       
30.  04/17      J. Egger, D. Schmalstieg, X. Chen, W. G. Zoller, A. Hann
         “Interactive Outlining of Pancreatic Cancer Liver Metastases in Ultrasound Images“
         In: Sci. Rep. 7, 892, 2017. (Link) (IF 4.122 (2017))
       
29.  03/17      J. Egger, M. Gall, J. Wallner, P. Boechat, A. Hann, X. Li, X. Chen, D. Schmalstieg
         “HTC Vive MeVisLab integration via OpenVR for medical applications“
         In: PLoS ONE 12(3): e0173972, Mar. 2017. (Link) (pdf) (IF 2.766 (2017))
       
28.  03/17      J. Egger, M. Gall, A. Tax, M. Ücal, U. Zefferer, X. Li, G. von Campe, U. Schäfer, D. Schmalstieg, X. Chen
         “Interactive reconstructions of cranial 3D implants under MeVisLab as an alternative to commercial planning software“
         In: PLoS ONE, 12(3): e0172694, 2017. (Link) (IF 2.766 (2017))
       
27.  01/17      A. Hann, W. Bohle, J. Egger, W. Zoller
         “Feasibility of alternating induction and maintenance chemotherapy in pancreatic cancer“
         In: Sci. Rep. 7, 41549, 2017. (Link) (pdf) (IF 4.122 (2017))
       
26.  12/16      X. Chen, X. Li, L. Xu, Y. Sun, C. Politis, J. Egger
         “Development of a computer-aided design software for dental splint in orthognathic surgery“
         In: Sci. Rep. 6, 38867, 2016. (Link) (IF 4.259 (2016))
       
25.  10/16      A. Hann, W. Bohle, J. Egger, W. Zoller
         “Improvement in advanced pancreatic cancer survival with novel chemotherapeutic strategies – experience of a community based hospital“
         In: Z Gastroenterol 54(10), 1138-1142, October 2016. (IF 1.618 (2016))
       
24.  06/16      T. Lüddemann, J. Egger
         “Iterative-cuts: longitudinal and scale-invariant segmentation via user-defined templates for rectosigmoid colon in gynecological brachytherapy“
         In: J. Med. Imag. 3(2), 024004 (2016), doi: 10.1117/1.JMI.3.2.024004, June 2016. (Link) (thesis) (IF 0.482 (2016))
       
23.  02/16      X. Chen, L. Xu, Y. Yang, J. Egger
         “A semi-automatic computer-aided method for surgical template design“
         In: Sci. Rep. 6, 20280, 2016. (Link) (pdf) (IF 4.259 (2016))
       
22.  10/15      J. Egger, H. Busse, P. Brandmaier, D. Seider, M. Gawlitza, S. Strocka, P. Voglreiter, M. Dokter, M. Hofmann, B. Kainz, A. Hann, X. Chen, T. Alhonnoro, M. Pollari, D. Schmalstieg, M. Moche
         “Interactive Volumetry of Liver Ablation Zones“
         In: Sci. Rep. 5, 15373, 2015. (Link) (pdf) (IF 5.228 (2015))
       
21.  04/15      X. Chen, L. Xu, Y. Wang, H. Wang, F. Wang, X. Zeng, Q. Wang, J. Egger
         “Development of a Surgical Navigation System based on Augmented Reality using an Optical see-through Head-mounted Display“
         In: Journal of Biomedical Informatics (JBI), 55:124-31, April 2015. (IF 2.447 (2015))
       
20.  06/14      J. Egger
         “Refinement-Cut: User-Guided Segmentation Algorithm for Translational Science“
         In: Sci. Rep. 4, 5164, June 2014. (Link) (IF 5.578 (2014))
       
19.  04/14      R. Schwarzenberg, B. Freisleben, C. Nimsky, J. Egger
         “Cube-Cut: Vertebral Body Segmentation in MRI-Data through Cubic-Shaped Divergences“
         In: PLoS One, April 2014. (Link) (thesis) (IF 3.234 (2014))
       
18.  03/14      X. Chen, J. Egger
         “Development of an Open Source Software Module for Enhanced Visualization during MR-Guided Interstitial Gynecologic Brachytherapy“
         In: SpringerPlus, 3:167, March 2014. (Link) (pdf) (IF 0.982 (2015))
       
17.  03/14      D. Zukic, A. Vlasak, J. Egger, D. Horinek, C. Nimsky, A. Kolb
         “Robust Detection and Segmentation for Diagnosis of Vertebral Diseases using Routine MR Images“
         In: Computer Graphics Forum, Article first published online: 4 March 2014. (IF 1.642 (2014))
       
16.  02/14      J. Egger, T. Lüddemann, R. Schwarzenberg, B. Freisleben, C. Nimsky
         “Interactive-Cut: Real-Time Feedback Segmentation for Translational Research“
         In: Journal of Computerized Medical Imaging and Graphics, Elsevier, Available online 11 February 2014. (IF 1.218 (2014))
       
15.  10/13      J. Egger
         “PCG-Cut: Graph Driven Segmentation of the Prostate Central Gland“
         In: PLoS One. 2013; 8(10):e76645. Epub 2013 Oct 11. (Link) (IF 3.534 (2013))
       
14.  08/13      J. Egger
         “Image-guided therapy system for interstitial gynecologic brachytherapy in a multimodality operating suite“
         In: SpringerPlus, 2:395, 2013. (Link) (pdf) (IF 0.982 (2015))
       
13.  03/13      J. Egger, T. Kapur, A. Fedorov, S. Pieper, J. V. Miller, H. Veeraraghavan, B. Freisleben, A. J. Golby, C. Nimsky, R. Kikinis
         “GBM Volumetry using the 3D Slicer Medical Image Computing Platform“
         In: Sci Rep., Nature Publishing Group (NPG), 3:1364, 2013. (Link) (IF 5.078 (2013))
       
12.  01/13      D. Kuhnt, M. H. A. Bauer, J. Egger, D. Merhof, M. Richter, T. Kapur, J. Sommer, C. Nimsky
         “Fiber tractography based on diffusion tensor imaging (DTI) compared with High Angular Resolution Diffusion Imaging (HARDI) with compressed sensing (CS) – initial experience and clinical impact“
         In: Neurosurgery, 72 Suppl 1:165-75, 2013. (IF 3.031 (2013))
       
11.  12/12      J. Egger, D. Zukic, B. Freisleben, A. Kolb, C. Nimsky
         “Segmentation of pituitary adenoma: A graph-based method vs. a balloon inflation method“
         In: Computer Methods and Programs in Biomedicine, Elsevier, 2012. (IF 1.555 (2012))
       
10.  12/12      J. Egger, T. Kapur, C. Nimsky, R. Kikinis
         “Pituitary Adenoma Volumetry with 3D Slicer“
         In: PLoS ONE, 2012. (Link) (IF 3.730 (2012))
       
9.  08/12      T. Kapur, J. Egger, A. Damato, E. Schmidt, A. Viswanathan
         “3-T MR-guided brachytherapy for gynecologic malignancies“
         In: Magnetic Resonance Imaging, Elsevier, 12 pages, 2012. (IF 2.566 (2012))
       
8.  05/12      J. Egger, B. Freisleben, C. Nimsky, T. Kapur
         “Template-Cut: A Pattern-Based Segmentation Paradigm“
         In: Nature - Scientific Reports, Nature Publishing Group (NPG), 2(420), 2012. (Link) (IF 2.927 (2012))
       
7.  02/12      J. Egger, J. Tokuda, L. Chauvin, B. Freisleben, C. Nimsky, T. Kapur, W. Wells III
         “Integration of the OpenIGTLink Network Protocol for Image-Guided Therapy with the Medical Platform MeVisLab“
         In: International Journal of Medical Robotics and Computer Assisted Surgery, Wiley-Blackwell, 2012. (IF 1.488 (2012))
       
6.  02/12      J. Egger, T. Kapur, T. Dukatz, M. Kolodziej, D. Zukic, B. Freisleben, C. Nimsky
         “Square-Cut: A Segmentation Algorithm on the Basis of a Rectangle Shape“
         In: PLoS ONE, 2012. (Link) (IF 3.730 (2012))
       
5.  01/12      J. Egger, S. Grosskopf, C. Nimsky, T. Kapur, B. Freisleben
         “Modeling and Visualization Techniques for Virtual Stenting of Aneurysms and Stenoses“
         In: Journal of Computerized Medical Imaging and Graphics, Elsevier, 2012. (IF 1.664 (2012))
       
4.  08/11      J. Egger, R. Colen, B. Freisleben, Ch. Nimsky
         “Manual Refinement System for Graph-Based Segmentation Results in the Medical Domain“
         In: Journal of Medical Systems, Springer, Aug. 2011. (IF 1.132 (2011))
       
3.  03/11      J. Egger, C. Kappus, B. Freisleben, Ch. Nimsky
         “A Medical Software System for Volumetric Analysis of Cerebral Pathologies in Magnetic Resonance Imaging (MRI) Data“
         In: Journal of Medical Systems, Springer, Mar. 2011. (IF 1.132 (2011))
       
2.  02/11      R. D. Renapurkar, R. M. Setser, T. P. O’Donnell, J. Egger, M. L. Lieber, M. Y. Desai, A. E. Stillman, P. Schoenhagen, S. D. Flamm
         “Aortic volume as an indicator of disease progression in patients with untreated infrarenal abdominal aneurysm“
         In: European Journal of Radiology, 81(2):e87-93, Epub Feb. 2011. (IF 2.606 (2011))
       
1.  06/10      M. H. A. Bauer, S. Barbieri, J. Klein, J. Egger, D. Kuhnt, B. Freisleben, H. K. Hahn, Ch. Nimsky
         “Boundary Estimation of Fiber Bundles derived from Diffusion Tensor Images“
         In: International Journal of Computer Assisted Radiology and Surgery (IJCARS), 6(1):1-11, Epub Jun. 2010. (IF 1.481 (2011))